most recent 30 from http://asksci.com 2010-07-29T19:07:22Z http://asksci.com/feeds/tag/imagej http://www.creativecommons.org/licenses/by-nc/2.5/rdf http://asksci.com/questions/192/how-to-get-data-from-summary-window Ken 2010-03-27T00:44:05Z 2010-07-25T00:22:34Z

<p>Dear all</p> <p>i process my image with analyze particle function and got Summary window that include</p> <p>Slide | Count | Total Area | Average size | Area fraction</p> <p>How to get data from column "Area Fraction" ?</p> <p>I try to use command "getResult", but it not work. I think "getResult" use with "Result" window not "summary" window.</p> <p>Thank for your help, Pavita </p>

http://asksci.com/questions/242/how-to-read-confocal-stacks-in-imagej glucose 2010-04-17T18:54:17Z 2010-07-24T23:22:34Z

<p>How to read confocal stacks in imagej</p>

http://asksci.com/questions/200/are-there-imagej-plugins-for-photon-counting-histogram-and-correlation-analysis glucose 2010-03-27T00:56:45Z 2010-07-20T11:22:36Z

<p>Are there ImageJ Plugins for Photon Counting Histogram and Correlation Analysis</p>

http://asksci.com/questions/233/what-is-the-imagej-plugin-to-read-lsm-710-files glucose 2010-04-10T18:13:21Z 2010-07-17T23:22:36Z

<p>What is the imagej plugin to read lsm 710 files?</p>

http://asksci.com/questions/186/how-to-do-imagej-live-dead-assay glucose 2010-03-26T05:35:23Z 2010-07-17T04:22:36Z

<p>How to do imagej live dead assay?</p>

http://asksci.com/questions/193/cant-multithread-on-third-party-plugins Ken 2010-03-27T00:45:18Z 2010-07-17T03:22:35Z

<p>Hi,</p> <p>I am trying to get multithreading to work with a number of plugins in ImageJ, most important to me is Object Counter 3D. When I try to use this program on a 64 mb file that includes all objects of volume 16-61200000 voxels, I run into a processing time of about 6-8 hours. I intend to scale this up by a factor of 10, which means that unless I can use all 8 cores on my computer instead of 1, then I'll be waiting for days. I've noticed that I cannot get third party plugins to use more than 1 core, but the native ImageJ functions do use all 8 cores.</p> <p>I have a Dell PowerEdge 1900 with dual xeon processors (1.6 ghz) with 16 gb ddr2 ram. I am using Redhat Linux Server Edition Version 5.4 64 bit. I have the latest versions of ImageJ 64 bit and Java installed, except Java3D, which I am in the process of getting. I've been trolling around on the forums and I get the impression that many plugins are not written to utilize multiple cores, although I am not sure if this is true. If Object Counter 3d does not utilize multithreading, might anyone be able to suggest how to modify the source code? I am open to any and all solutions to my problem, and I apologize if someone has already posted about this, but I really did try to find a post about it before. </p> <p>Thanks in advance. </p>

http://asksci.com/questions/254/how-to-remove-non-numerical-value-in-image-j glucose 2010-04-20T02:11:25Z 2010-04-20T02:11:25Z

<p>After some process, I got non-numerical value with some of my pixels.</p> <p>How do I get rid of them?</p> <p>I can get rid of them with Matlab, but I can not write double precision tiff in Matlab.</p>

http://asksci.com/questions/195/how-to-import-files-into-image-j Ken 2010-03-27T00:47:49Z 2010-03-28T16:48:29Z

<p>how to import files into image j</p>

http://asksci.com/questions/172/what-is-the-best-way-to-remove-western-blot-background-in-imagej glucose 2010-03-22T18:29:54Z 2010-03-22T18:29:54Z

<p>what is the best way to remove western blot background in imagej </p>

http://asksci.com/questions/138/how-do-you-import-many-confocal-files-into-image-j glucose 2010-01-29T17:54:25Z 2010-02-01T10:46:15Z

<p>I know you can do it one by one, but is there an easier way to do it?</p>

http://asksci.com/questions/77/is-there-a-image-j-manual-somewhere unknown (google) 2009-10-27T00:30:35Z 2010-01-21T08:26:26Z

<p>I am starting to learn how to use Image J. </p> <p>Is there any good manual around?</p>

http://asksci.com/questions/9/list-of-good-imagej-plugins glucose 2009-10-08T00:39:29Z 2010-01-20T11:45:06Z

<p>One can not use Image J without plugins. </p> <p>What are your favorite imagej plugins?</p>